Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907758.1_cds_XP_016457874.1_51555
CDS Infomation

[gene=LOC107781653] [db_xref=GeneID:107781653] [protein=phosphoinositide phospholipase C 2-like] [protein_id=XP_016457874.1] [location=join(24561..24884,25926..26122,26526..26661,26752..26997,27102..27334,27644..27761,27848..28000,28093..28179,28260..28556)] [gbkey=CDS]
Sequence

ATGTCTAAACAAACATACAGAATATGCTGTTTTCAGAGGAAATTCAAGATGAAAGAAGCT
GAGCCACCTAATGAGATCAAGGATTTGTTTAACAGATTCTCAGAAAATGGTATAATGACT
GCAGAACATTTACACAGATTCTTGAAAGATGTTCAAAGGGAAGATAAAGTTACAAAAGAA
GAAGCTGAATCTGTGTTGGAATTTGCACTTAAACTTGTTCATGAGCATCTTAATATTGTT
TTTCATAGAAAAGGTCTCAATCTTGATGGCTTTTTTCGGTATCTCTTCAGTGATGCTAAT
GCTTCTCTCTCCCCACACAAAAAGGTTCACCATGACATGACTGCACCTTTGTCTCACTAT
TTCATTTACACCAGTCACAATACCTATCTCACCGGAAATCAACTCAATAGTGACTGCAGC
GATGTGCCTATAATAAAGGCGTTGCAGCGAGGTGTCCGAGTTATTGAATTAGACATGTGG
CCGAATTCCTCGAAAGACAATGTGGATATCCTTCATGGAGGGACACTAACACCTCCAGTG
GAACTTATCCAATGTTTGAAATCAATAAAGGAACATGCTTTTGTGGCATCTGAATATCCT
GTAATTTTAACTCTAGAAGACCACCTCACTCCTAATCTTCAGGCTAAAGTAGCTGAGATG
GTCACTCAAATATTTGGAGATATGCTGTTCACCTGTGGGGCAGAATGCTTGTCAGAATTC
CCTTCTCCAGATTCGTTGAAGGGGCGGGTTATCATCTCAACTAAACCACCAAAAGAATAT
CTTGAAACTAAGAAACCAAATGAGAAAGATAATGGTTCTCAGAAAGGGAAGAAATCATCA
GAGGAGAAAGCATGGGGAGCAGAAATTTCCGATCTTAGTAAAAAACTGATAGCTTTATAT
GAGAACAAAGAAACTGGAGAATGTCAAGACGAGGAAGCTGATTCTCATCATGAGAACCCC
AATATACAGCAGAATACAGCTCCTGAGTATAAACACTTGATTGCCATTCAAGGAGCAAAA
TCAAAAGGTCCAACAAGCGAATGGCTAACCGTGGATCCTATTAAGGTGAAACGCATTAGC
TTGAATGAAGAAAAGCTCACAAATGTTGCCCTCAAACATGGGAAAGAGTTAATCAGGTTT
ACTCAGAGAAATTTGGTAAGAGTATATCCAAAAGGTATACGAGTCGACTCTTCCAATTAC
AATCCACTAATAGGATGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGAAAT
GGAAGGCCTTTGTGGTTAATGCAAGGGATGTTCAGAGCAAATGGTGGCTGTGGTTATGTC
AAAAAACCAGAACTTCTCTTAAAAGACGGTCCAAATAATGAGGTCTATGATCCTAAACGG
CTCTTATCATTGAAAACCACCCTGAAGGTGAAAATATACATGGGAAAAGGTTGGCATTTG
GACTTTAAACGTACACACTTTGATATATATTCTCCACCAGACTTCTATGTCAAGATTGCT
ATTGCCGGAGTTCCTGCAGATTCAGGAGTTAAGAAAACGAGGCCAATAGAGGATGACTGG
GTACCAACATGGAATGATGAATTTGAGTTCCCATTGACAGTTCCAGAGATTGCATTGCTT
CGTGTAGAAGTCCATGAGTATGATATGTCAGAGATCGACGATTTTGGTGGACAAACTTGC
ATTCCTGTTTCAGAGCTCAGAACAGGAATACGAGCAGTACCTCTTTACAATGAAAAAGGA
GAGAAATATCCTTCTGTTAAACTACTTATGCGCTTCGAATTTGTAAAATAA

Peptide Sequence

PEP ID

XP_016457874.1
PEP Infomation

PREDICTED: phosphoinositide phospholipase C 2-like [Nicotiana tabacum]
Sequence

MSKQTYRICCFQRKFKMKEAEPPNEIKDLFNRFSENGIMTAEHLHRFLKDVQREDKVTKE
EAESVLEFALKLVHEHLNIVFHRKGLNLDGFFRYLFSDANASLSPHKKVHHDMTAPLSHY
FIYTSHNTYLTGNQLNSDCSDVPIIKALQRGVRVIELDMWPNSSKDNVDILHGGTLTPPV
ELIQCLKSIKEHAFVASEYPVILTLEDHLTPNLQAKVAEMVTQIFGDMLFTCGAECLSEF
PSPDSLKGRVIISTKPPKEYLETKKPNEKDNGSQKGKKSSEEKAWGAEISDLSKKLIALY
ENKETGECQDEEADSHHENPNIQQNTAPEYKHLIAIQGAKSKGPTSEWLTVDPIKVKRIS
LNEEKLTNVALKHGKELIRFTQRNLVRVYPKGIRVDSSNYNPLIGWMHGAQMVAFNMQGN
GRPLWLMQGMFRANGGCGYVKKPELLLKDGPNNEVYDPKRLLSLKTTLKVKIYMGKGWHL
DFKRTHFDIYSPPDFYVKIAIAGVPADSGVKKTRPIEDDWVPTWNDEFEFPLTVPEIALL
RVEVHEYDMSEIDDFGGQTCIPVSELRTGIRAVPLYNEKGEKYPSVKLLMRFEFVK

Transcript Sequence

Gene sequence data has not been registered.